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Trait-based meta-analysis of microbial guilds in the iron redox cycle

  • Fernando Díaz-González
  • , Camila Rojas-Villalobos
  • , Francisco Issotta
  • , Sofía Reyes-Impellizzeri
  • , Sabrina Hedrich
  • , D. Barrie Johnson
  • , Pedro Temporetti
  • , Raquel Quatrini
    • Centro Científico y Tecnológico de Excelencia Ciencia & Vida, Santiago, Chile
    • San Sebastián University
    • Universidad Mayor
    • Technical University Bergakademie Freiberg
    • Bangor University
    • Natural History Museum
    • Universidad Nacional del Comahue

    Research output: Contribution to journalArticlepeer-review

    2 Downloads (Pure)

    Abstract

    Microbial iron (Fe) redox cycling underpins key biogeochemical processes, yet the functional diversity, ecological roles, and trait architectures of iron-transforming microbes remain poorly synthesized across global environments. Here, we present a systematic review and trait-based meta-analysis of 387 microbial taxa spanning 314 studies and 76 years of research, integrating phenotypic, genomic, and environmental data to define ecologically coherent microbial iron redox cycle guilds. Rather than relying on taxonomy, our framework delineates first-order functional guilds—Fe(III) reducers, Fe(II) oxidizers, and dual-capacity Fe oxidizers/reducers—and resolves second-order guilds based on trait syndromes, such as acidophily, redox flexibility, or metabolic breadth. Trait profiling revealed that iron-cycling capacities frequently transcend phylogenetic boundaries, with multiple guilds converging in chemically stratified hotspots like hot springs, hydrothermal vents, and acid mine drainages. Dual-capacity Fe oxidizers/reducers (e.g., Acidithiobacillus ferrooxidans and Metallosphaera sedula ) emerged as overlooked mediators of “cryptic” iron cycling, possessing genomic repertoires capable of toggling between oxidative and reductive modes in response to redox oscillations. Hierarchical clustering and kernel density analyses of ecophysiological traits highlighted niche partitioning along key environmental filters, including pH, iron availability, salinity, and temperature. Collectively, this work introduces the Guild Exploitation Pattern as a conceptual lens for understanding iron microbiome assembly, providing a data-driven foundation for predicting microbial contributions to iron cycling under changing environmental conditions. IMPORTANCE Iron redox reactions shape nutrient turnover, contaminant mobility, and primary productivity, yet the microbes driving these processes are often studied in isolation. By integrating decades of data into a trait-based guild framework, we reveal the ecophysiological diversity and niche differentiation of microbial iron redox cycling taxa across environments. Our synthesis exposes major gaps, such as limited trait data for >80% of dual-capacity Fe oxidizing/reducing species and highlights the need for functional trait surveys to complement metagenomics and cultivation efforts. The guild framework presented here advances predictive microbial ecology by linking metabolic traits with environmental gradients, offering a robust foundation for incorporating iron cycling into ecosystem models and biogeochemical forecasts.
    Original languageEnglish
    Article number12
    Pages (from-to)1-23
    Number of pages23
    JournalmSystems
    Volume11
    Issue number2
    Early online date26 Jan 2026
    DOIs
    Publication statusPublished - 18 Feb 2026

    Bibliographical note

    Publisher Copyright:
    © 2026 Díaz-González et al. This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license.

    Funding

    This work builds upon 76 years of research and the contributions of more than a thousand scientists whose collective laid the foundation for this synthesis. The authors gratefully acknowledge support from Agencia Nacional de Investigación y Desarrollo (ANID)/BASAL/FB210008, ANID/FONDECYT 1221035 (R.Q.), and ANID/ FONDECYT 3230527 (F.I.) grants. Additional support was provided by doctoral scholarships ANID/21241467 (C.R.-V.) and ANID/21241350 (S.R.-I.) and by the Vicerrectoría de Investigación y Doctorados of Universidad San Sebastián through PhD scholarship 10202955 (F.D.-G.). Funders: ANID (grant nos. BASAL/FB210008 and FONDECYT 1221035 [R.Q.], FONDECYT 3230527 [F.I.], ANID/PhD Scholarship 21241467 [C.R.-V.], and ANID/PhD Scholarship 21241350 [S.R.-I.]) and Vicerrectoría de Investigación y Doctorados Universidad San Sebastián (grant no. PhD scholarship 10202955 [F.D.-G.]). ANID (grant nos. BASAL/FB210008 and FONDECYT 1221035 [R.Q.], FONDECYT 3230527 [F.I.], ANID/PhD Scholarship 21241467 [C.R.-V.], and ANID/PhD Scholarship 21241350 [S.R.-I.]) and Vicerrectoría de Investigación y Doctorados Universidad San Sebastián (grant no. PhD scholarship 10202955 [F.D.-G.]).

    FundersFunder number
    Agencia Nacional de Investigación y Desarrollo
    San Sebastián University
    Fondo Nacional de Desarrollo Científico y TecnológicoANID/21241350, 21241467, 1221035, 3230527, 21241350, ANID/21241467
    San Sebastián University10202955
    Agencia Nacional de Investigación y DesarrolloBASAL/FB210008

      Keywords

      • biogeochemical cycling
      • guild exploitation pattern
      • meta-analysis
      • microbial iron redox cycle
      • trait-based ecology

      ASJC Scopus subject areas

      • Microbiology
      • Ecology, Evolution, Behavior and Systematics
      • Physiology
      • Biochemistry
      • Modelling and Simulation
      • Molecular Biology
      • Genetics
      • Computer Science Applications

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