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Machine learning and physical based modeling for cardiac hypertrophy

  • Bogdan Milićević
  • , Miljan Milošević
  • , Vladimir Simić
  • , Andrej Preveden
  • , Lazar Velicki
  • , Đorđe Jakovljević
  • , Zoran Bosnić
  • , Matej Pičulin
  • , Bojan Žunkovič
  • , Miloš Kojić
  • , Nenad Filipović
    • University of Kragujevac
    • BIOIRC - Bioengineering Research and Development Center
    • Belgrade Metropolitan University
    • University of Novi Sad
    • University of Ljubljana
    • Serbian Academy of Sciences and Arts
    • Houston Methodist
    • Newcastle University

    Research output: Contribution to journalArticlepeer-review

    127 Downloads (Pure)

    Abstract

    Background and objective: Predicting the long-term expansion and remodeling of the left ventricle in patients is challenging task but it has the potential to be clinically very useful. Methods: In our study, we present machine learning models based on random forests, gradient boosting, and neural networks, used to track cardiac hypertrophy. We collected data from multiple patients, and then the model was trained using the patient's medical history and present level of cardiac health. We also demonstrate a physical-based model, using the finite element procedure to simulate the development of cardiac hypertrophy. Results: Our models were used to forecast the evolution of hypertrophy over six years. The machine learning model and finite element model provided similar results. Conclusions: The finite element model is much slower, but it's more accurate compared to the machine learning model since it's based on physical laws guiding the hypertrophy process. On the other hand, the machine learning model is fast but the results can be less trustworthy in some cases. Both of our models, enable us to monitor the development of the disease. Because of its speed machine learning model is more likely to be used in clinical practice. Further improvements to our machine learning model could be achieved by collecting data from finite element simulations, adding them to the dataset, and retraining the model. This can result in a fast and more accurate model combining the advantages of physical-based and machine learning modeling.

    Original languageEnglish
    Article numbere16724
    Number of pages15
    JournalHeliyon
    Volume9
    Issue number6
    Early online date27 May 2023
    DOIs
    Publication statusPublished - 3 Jun 2023

    Bibliographical note

    This is an open access article under the CC BY-NC-ND license
    (http://creativecommons.org/licenses/by-nc-nd/4.0/).

    Funder

    This research was supported by the European Union’s Horizon 2020 research and innovation programme under grant agreement No 952603 (http://sgabu.eu/). This article reflects only the author's view. The Commission is not responsible for any use that may be made of the information it contains. Research was also supported by the SILICOFCM project that has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No 777204. This article reflects only the authors' views. The European Commission is not responsible for any use that may be made of the information the article contains. The research was also funded by the Ministry of Education, Science and Technological Development of the Republic of Serbia, contract numbers [451-03-68/2022-14/200107 (Faculty of Engineering, University of Kragujevac), 451-03-68/2022-14/200122 (Faculty of Science, University of Kragujevac) and 451-03-68/2022-14/200378 (Institute for Information Technologies Kragujevac, University of Kragujevac)].

    Funding

    This research was supported by the European Union’s Horizon 2020 research and innovation programme under grant agreement No 952603 ( http://sgabu.eu/ ). This article reflects only the author's view. The Commission is not responsible for any use that may be made of the information it contains. Research was also supported by the SILICOFCM project that has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No 777204 . This article reflects only the authors' views. The European Commission is not responsible for any use that may be made of the information the article contains. The research was also funded by the Ministry of Education, Science and Technological Development of the Republic of Serbia , contract numbers [ 451-03-68/2022-14/200107 ( Faculty of Engineering, University of Kragujevac ), 451-03-68/2022-14/200122 ( Faculty of Science, University of Kragujevac ) and 451-03-68/2022-14/200378 (Institute for Information Technologies Kragujevac, University of Kragujevac)]. This research was supported by the European Union's Horizon 2020 research and innovation programme under grant agreement No 952603 (http://sgabu.eu/). This article reflects only the author's view. The Commission is not responsible for any use that may be made of the information it contains. Research was also supported by the SILICOFCM project that has received funding from the European Union's Horizon 2020 research and innovation programme under grant agreement No 777204. This article reflects only the authors' views. The European Commission is not responsible for any use that may be made of the information the article contains. The research was also funded by the Ministry of Education, Science and Technological Development of the Republic of Serbia, contract numbers [451-03-68/2022-14/200107 (Faculty of Engineering, University of Kragujevac), 451-03-68/2022-14/200122 (Faculty of Science, University of Kragujevac) and 451-03-68/2022-14/200378 (Institute for Information Technologies Kragujevac, University of Kragujevac)].

    FundersFunder number
    University of Kragujevac
    European Commission
    Horizon Europe
    ???publication-publication-funding-organisation-not-added???451-03-68/2022-14/200107, 200378
    Horizon Europe777204, 952603
    University of Kragujevac451-03-68/2022-14/200378, 451-03-68/2022-14/200122

    Keywords

    • Finite element analysis
    • Machine learning
    • Left ventricle mode
    • Cardiac hypertrophy
    • Disease progress tracking

    ASJC Scopus subject areas

    • General

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