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Research Output 2004 2019

  • 118 Citations
  • 7 h-Index
  • 18 Article
  • 12 Conference proceeding
  • 6 Chapter
  • 1 Other
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Article
2019
1 Citation (Scopus)
34 Downloads (Pure)

Modelling and Control of Gene Regulatory Networks for Perturbation Mitigation

Foo, M., Kim, J. & Bates, D., 29 Mar 2019, In : IEEE/ACM Transactions on Computational Biology and Bioinformatics. 16, 2, p. 583-595 13 p., 8254368.

Research output: Contribution to journalArticle

Open Access
File
Gene Regulatory Networks
Gene Regulatory Network
S-system
Genes
Perturbation
1 Citation (Scopus)
56 Downloads (Pure)

PID and state feedback controllers using DNA strand displacement reactions

Paulino, N., Foo, M., Kim, J. & Bates, D., 1 Oct 2019, In : IEEE Control Systems Letters. 3, 4, p. 805-810 6 p., 8721529.

Research output: Contribution to journalArticle

Open Access
File
State feedback
State Feedback
DNA
Nucleic acids
Controller
1 Citation (Scopus)

Robustness analysis of a nucleic acid controller for a dynamic biomolecular process using the structured singular value

Paulino, N., Foo, M., Kim, J. & Bates, D., Jun 2019, In : Journal of Process Control. 78, p. 34-44 11 p.

Research output: Contribution to journalArticle

Structured Singular Value
Robustness Analysis
Nucleic acids
Dynamic Process
Robustness (control systems)
2018
2 Citations (Scopus)
8 Downloads (Pure)

A Framework for Engineering Stress Resilient Plants Using Genetic Feedback Control and Regulatory Network Rewiring

Foo, M., Gherman, I., Zhang, P., Bates, D. & Denby, K., 15 Jun 2018, In : ACS Synthetic Biology. 7, 6, p. 1553-1564 12 p., 7.

Research output: Contribution to journalArticle

Open Access
File
Pathogens
Feedback control
Controllers
Synthetic Biology
Arabidopsis
1 Citation (Scopus)
18 Downloads (Pure)

Computationally Efficient Modelling of Stochastic Spatio-Temporal Dynamics in Biomolecular Networks

Kim, J., Foo, M. & Bates, D. G., 22 Feb 2018, In : Scientific Reports. 8, 1, 1 p., 3498.

Research output: Contribution to journalArticle

Open Access
File
Molecules
Molecular interactions
Computational efficiency
Trajectories
Kinetics
1 Citation (Scopus)
9 Downloads (Pure)

Waveforms of molecular oscillations reveal circadian timekeeping mechanisms

Jo, H-H., Kim, Y. J., Kim, J. K., Foo, M., Somers, D. E. & Kim, P-J., 26 Nov 2018, In : Communications Biology. 1, 207, 11 p.

Research output: Contribution to journalArticle

Open Access
File
Circadian Clocks
Proteins
Biochemical Phenomena
Biological Clocks
Seedlings
2017
4 Citations (Scopus)
11 Downloads (Pure)

Design of an embedded inverse-feedforward biomolecular trackingcontroller for enzymatic reaction processes

Foo, M., Kim, J., Sawlekar, R. & Bates, D., 6 Apr 2017, In : Computers and Chemical Engineering. 99, p. 145-157 13 p.

Research output: Contribution to journalArticle

Open Access
File
Controllers
Chemical reactions
Circuit theory
Feedback
Chemical engineering
2016
4 Citations (Scopus)
9 Downloads (Pure)

Exploiting the dynamic properties of covalent modification cycle for the design of synthetic analog biomolecular circuitry

Foo, M., Sawlekar, R. & Bates, D. G., 14 Nov 2016, In : Journal of Biological Engineering. 10, 15, 17 p., 10.

Research output: Contribution to journalArticle

Open Access
File
Synthetic Biology
Chemical reactions
DNA
Cell signaling
Nonlinear feedback
9 Citations (Scopus)
9 Downloads (Pure)

Kernel Architecture of the Genetic Circuitry of the Arabidopsis Circadian System

Foo, M., Somers, D. E. & Kim, P. J., 1 Feb 2016, In : PLoS Computational Biology. 12, 2, 21 p., e1004748.

Research output: Contribution to journalArticle

Open Access
File
Arabidopsis
circadian rhythm
Clocks
Circadian Clocks
kernel
6 Citations (Scopus)
7 Downloads (Pure)

Nanomechanical Contribution of Collagen and von Willebrand Factor A in Marine Underwater Adhesion and Its Implication for Collagen Manipulation

Yoo, H. Y., Huang, J., Li, L., Foo, M., Zeng, H. & Hwang, D. S., 14 Mar 2016, In : Biomacromolecules. 17, 3, p. 946-953 8 p.

Research output: Contribution to journalArticle

Open Access
File
von Willebrand Factor
Collagen
Adhesion
Bearings (structural)
Proteins
6 Downloads (Pure)

Proportional-integral degradation control allows accurate tracking of biomolecular concentrations with fewer chemical reactions

Foo, M., Kim, J., Kim, J. & Bates, D. G., 23 Dec 2016, In : IEEE Life Sciences Letters. 2, 4, p. 55-58 4 p.

Research output: Contribution to journalArticle

Open Access
File
Terminology
Chemical reactions
Degradation
Networks (circuits)
Tuning
6 Citations (Scopus)
9 Downloads (Pure)

Recombinant mussel proximal thread matrix protein promotes osteoblast cell adhesion and proliferation

Yoo, H. Y., Song, Y. H., Foo, M., Seo, E., Hwang, D. S. & Seo, J. H., 16 Feb 2016, In : BMC Biotechnology. 16, 9 p., 16.

Research output: Contribution to journalArticle

Open Access
File
Bivalvia
Osteoblasts
Cell Adhesion
Collagen
Cell Proliferation
13 Citations (Scopus)
13 Downloads (Pure)

Sugary interfaces mitigate contact damage where stiff meets soft

Yoo, H. Y., Iordachescu, M., Huang, J., Hennebert, E., Kim, S., Rho, S., Foo, M., Flammang, P., Zeng, H., Hwang, D., Waite, J. H. & Hwang, D. S., 16 Jun 2016, In : Nature Communications. 7, 8 p., 11923 .

Research output: Contribution to journalArticle

Open Access
File
dopa
Dihydroxyphenylalanine
Licensure
Bionics
Bearings (structural)
2015
2 Citations (Scopus)

System identification of the Arabidopsis plant circadian system

Foo, M., Somers, D. E. & Kim, P-J., 7 Feb 2015, In : Journal of the Korean Physical Society. 66, 4, p. 700-712 13 p.

Research output: Contribution to journalArticle

system identification
genes
proteins
organisms
rhythm
8 Citations (Scopus)
14 Downloads (Pure)

Uncovering the nutritional landscape of food

Kim, S., Sung, J., Foo, M., Jin, Y. S. & Kim, P. J., 13 Mar 2015, In : PLoS ONE. 10, 3, 18 p., e0127128.

Research output: Contribution to journalArticle

Open Access
File
Nutrients
Food
nutrients
nutrient balance
nutrient requirements
2014
7 Citations (Scopus)
10 Downloads (Pure)

System identification and control of the broken river

Foo, M., Ooi, S. K. & Weyer, E., Mar 2014, In : IEEE Transactions on Control Systems Technology. 22, 2, p. 618-634 17 p.

Research output: Contribution to journalArticle

Open Access
File
Identification (control systems)
Rivers
Control systems
Controllers
Decentralized control
2006

Maximum Length Ternary Signal Design Based on Nyquist Point Mapping

Foo, M. F. L., Tan, A. H. & Basu, K. P., 2006, In : IFAC papers online. 39, 1, p. 1127-1132 6 p.

Research output: Contribution to journalArticle

Identification (control systems)
8 Citations (Scopus)

Ternary pseudorandom signal design for uniform excitation and reduced effect of nonlinear distortion

Tan, A. H. & Foo, M. F. L., 2006, In : Electronics Letters. 42, 12, p. 676-677 2 p.

Research output: Contribution to journalArticle